Phys. Rev. E 72, 025101 (2005) [4 pages]

Single-molecule chemical reactions: Reexamination of the Kramers approach

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G. Margolin1 and E. Barkai1,2
1Department of Chemistry and Biochemistry, Notre Dame University, Notre Dame, Indiana 46556, USA
2Department of Physics, Bar Ilan University, Ramat Gan, Israel 52900

Rapid Communication Received 15 April 2005; published 2 August 2005

Single-molecule chemical reactions yield insight into fluctuation phenomena that are obscured in the measurement of the ensemble of molecules. Kramers escape problem is investigated here in a framework suitable for single-molecule reactions. In particular we obtain distributions of escape times in simple limiting cases, rather than their mean, and investigate their sensitivity on initial conditions. Rich physical behaviors are observed: sub-Poissonian statistics when the dynamics is only slightly deviating from the Newtonian, super-Poissonian behavior when diffusion is dominating, and Poissonian behavior when Kramers original conditions hold. By varying initial conditions escape time distributions can follow a (usual) exponential or a τ−3∕2 decay, due to regular diffusion. We briefly address experimental results that yield the τ−3∕2 behavior (with cutoffs) and propose that this behavior is universal.


©2005 The American Physical Society

URL: http://link.aps.org/doi/10.1103/PhysRevE.72.025101
DOI: 10.1103/PhysRevE.72.025101
PACS: 02.50.−r, 82.37.Np, 05.40.−a

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